MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Proteus mirabilis
19428wB5_irhom_Sw
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 61
bases: 3,945,692 bps
CDS: 3,505
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 80
misc RNA:
Total features: 3,596
Total number of protein coding genes annotated/found:
3,505
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5038|JADGLF010000018.1
SEQF5038_00732
Genome Viewer
NA
AA
660/220
898-239
hypothetical protein
SEQF5038|JADGLF010000018.1
SEQF5038_00733
Genome Viewer
NA
AA
1251/417
1371-2621
hypothetical protein
SEQF5038|JADGLF010000018.1
SEQF5038_00734
Genome Viewer
NA
AA
786/262
2635-3420
5-oxoprolinase subunit A
SEQF5038|JADGLF010000018.1
SEQF5038_00735
Genome Viewer
NA
AA
102/34
3420-3521
hypothetical protein
SEQF5038|JADGLF010000018.1
SEQF5038_00736
Genome Viewer
NA
AA
1578/526
3502-5079
hypothetical protein
SEQF5038|JADGLF010000018.1
SEQF5038_00737
Genome Viewer
NA
AA
1746/582
5096-6841
Carbamoyl-phosphate synthase large chain
SEQF5038|JADGLF010000018.1
SEQF5038_00738
Genome Viewer
NA
AA
798/266
7001-7798
hypothetical protein
SEQF5038|JADGLF010000018.1
SEQF5038_00739
Genome Viewer
NA
AA
231/77
7899-8129
hypothetical protein
SEQF5038|JADGLF010000018.1
SEQF5038_00740
Genome Viewer
NA
AA
441/147
8601-8161
hypothetical protein
SEQF5038|JADGLF010000018.1
SEQF5038_00741
Genome Viewer
NA
AA
903/301
8712-9614
HTH-type transcriptional regulator HdfR
SEQF5038|JADGLF010000018.1
SEQF5038_00742
Genome Viewer
NA
AA
663/221
10273-9611
Nitrate/nitrite response regulator protein NarL
SEQF5038|JADGLF010000018.1
SEQF5038_00743
Genome Viewer
NA
AA
1830/610
12095-10266
Nitrate/nitrite sensor protein NarX
SEQF5038|JADGLF010000018.1
SEQF5038_00744
Genome Viewer
NA
AA
1392/464
12390-13781
Nitrate/nitrite transporter NarK
SEQF5038|JADGLF010000018.1
SEQF5038_00745
Genome Viewer
NA
AA
3762/1254
13837-17598
Respiratory nitrate reductase 1 alpha chain
SEQF5038|JADGLF010000018.1
SEQF5038_00746
Genome Viewer
NA
AA
1554/518
17598-19151
Respiratory nitrate reductase 1 beta chain
SEQF5038|JADGLF010000018.1
SEQF5038_00747
Genome Viewer
NA
AA
729/243
19148-19876
Nitrate reductase molybdenum cofactor assembly chaperone NarJ
SEQF5038|JADGLF010000018.1
SEQF5038_00748
Genome Viewer
NA
AA
678/226
19873-20550
Respiratory nitrate reductase 1 gamma chain
SEQF5038|JADGLF010000018.1
SEQF5038_00749
Genome Viewer
NA
AA
1194/398
20958-22151
4-hydroxymandelate oxidase
SEQF5038|JADGLF010000018.1
SEQF5038_00750
Genome Viewer
NA
AA
1692/564
23919-22228
Kdo(2)-lipid A phosphoethanolamine 7''-transferase
SEQF5038|JADGLF010000018.1
SEQF5038_00751
Genome Viewer
NA
AA
420/140
24460-24879
Formate dehydrogenase H
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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